Thank you for trying QIF2QFX
For your case I would suggest to use FIXMYQIF
instead at http://www.propersoft.net/FIXMYQIF
Once you load the QIF file, click on the Account Mapping tab and enter the account NAMES for corresponding accounts exactly as you have in Quicken
supports QIF files for all account types. Please follow the instructions on http://www.propersoft.net/FIXMYQIF
(select "<All accounts>" for the account dropdown list on the QIF import screen).
Another option would be to save accounts separately from your bank and convert them with QIF2QFX
Sergiy - ProperSoft Products Support